Every change Wellknown observed on this MCP server, newest first, with what it was before and what it became. Tool-surface changes carry the definition diff. Nothing here is edited after the fact.
Removed "get_transcriptomic_gene", "get_transcriptomic_pathways", "get_transcriptomic_provenance" and 2 more (14 tools before, 9 now)
Read primary gene expression results — Exact symbol or Ensembl ID. Returns DESeq2 estimates for all three contrasts unless one is specified, missing values, source tables, citations and limitations. No automatic alias substitution; not a functional measurement.
Read pathway results and sensitivities — Search frozen pathway identifiers by literal substring (spaces become underscores). Returns all FGSEA variants and BOTH CAMERA settings where tested, including nonsignificant results. Paginate at most five pathways per call. Not independent replication.
Read snapshot provenance, design and licences — Fixed Zenodo DOI, archive checksums, analysis commit, source-table checksums, field definitions, pooled sample design and attribution/licence notices. Separate from the live publication database; updates require a reviewed snapshot deployment.
Read complete robustness and follow-up summaries — Complete imported CAMERA tables for both settings, all ten Bayesian model summaries and diagnostics, alias sensitivity, exploratory DNA-maintenance or targeted redox results. topic defaults to all. Includes negative results and scientific limitations; no model fitting.
Find genes in the psilocin reanalysis — Literal symbol or Ensembl-ID discovery in fixed Zenodo v1.2.0 primary RNA-seq results. Returns bounded matches; not publication search or semantic search.
Added "get_transcriptomic_gene", "get_transcriptomic_pathways", "get_transcriptomic_provenance" and 2 more (9 tools before, 14 now)
Read primary gene expression results — Exact symbol or Ensembl ID. Returns DESeq2 estimates for all three contrasts unless one is specified, missing values, source tables, citations and limitations. No automatic alias substitution; not a functional measurement.
Read pathway results and sensitivities — Search frozen pathway identifiers by literal substring (spaces become underscores). Returns all FGSEA variants and BOTH CAMERA settings where tested, including nonsignificant results. Paginate at most five pathways per call. Not independent replication.
Read snapshot provenance, design and licences — Fixed Zenodo DOI, archive checksums, analysis commit, source-table checksums, field definitions, pooled sample design and attribution/licence notices. Separate from the live publication database; updates require a reviewed snapshot deployment.
Unknown → Live
First tool surface recorded: 9 tools (server version 1.1.0)
https://psilocybin-research.com/mcp (mcp_streamable_http) — from mcp_registry, with the record
Showing the latest 5 events. The API returns up to 500 and filters by kind: ?kind=tool_surface_changed
Read complete robustness and follow-up summaries — Complete imported CAMERA tables for both settings, all ten Bayesian model summaries and diagnostics, alias sensitivity, exploratory DNA-maintenance or targeted redox results. topic defaults to all. Includes negative results and scientific limitations; no model fitting.
Find genes in the psilocin reanalysis — Literal symbol or Ensembl-ID discovery in fixed Zenodo v1.2.0 primary RNA-seq results. Returns bounded matches; not publication search or semantic search.