VirtualFlyBrain

Name: VirtualFlyBrain
Author: org.virtualflybrain

MCP serverMCP

MCP server for Drosophila neuroscience data from VirtualFlyBrain

by org.virtualflybrainrepository ↗homepage ↗v1.11.2

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30-day availability109/109 checks ok

when	check	result	http	latency	detail
6 h ago	mcp initialize	ok	200	28 ms	server vfb3-mcp-server 1.11.2 · protocol 2025-06-18 · 11 tools
12 h ago	mcp initialize	ok	200	24 ms	server vfb3-mcp-server 1.11.2 · protocol 2025-06-18 · 11 tools
18 h ago	mcp initialize	ok	200	30 ms	server vfb3-mcp-server 1.11.2 · protocol 2025-06-18 · 11 tools
24 h ago	mcp initialize	ok	200	27 ms	server vfb3-mcp-server 1.11.2 · protocol 2025-06-18 · 11 tools
30 h ago	mcp initialize	ok	200	27 ms	server vfb3-mcp-server 1.11.2 · protocol 2025-06-18 · 11 tools
2 d ago	mcp initialize	ok	200	26 ms	server vfb3-mcp-server 1.11.2 · protocol 2025-06-18 · 11 tools
2 d ago	mcp initialize	ok	200	62 ms	server vfb3-mcp-server 1.11.2 · protocol 2025-06-18 · 11 tools
2 d ago	mcp initialize	ok	200	27 ms	server vfb3-mcp-server 1.11.2 · protocol 2025-06-18 · 11 tools
2 d ago	mcp initialize	ok	200	26 ms	server vfb3-mcp-server 1.11.2 · protocol 2025-06-18 · 11 tools
3 d ago	mcp initialize	ok	200	26 ms	server vfb3-mcp-server 1.11.2 · protocol 2025-06-18 · 11 tools

Tools observed via MCP handshake

get_term_info — Get term info for a VFB or anatomy ontology entity (VFB_*, FBbt_*, etc.). THIS IS THE QUERY DISCOVERY TOOL: the response's "Queries" array lists the valid query
run_query — Run a pre-computed query on a VFB entity. REQUIRED WORKFLOW: (1) call get_term_info on the ID first; (2) read the response's "Queries" array; (3) pass one of th
search_terms — Search VFB terms. This is the search virtualflybrain.org itself runs — the same Solr query, the same ranking — so what comes back first here is what a user woul
list_search_facets — List the type names search_terms can filter, exclude, boost or demote by, with the number of terms carrying each one. Call this instead of guessing: there are o
resolve_entity — Resolve an unresolved FlyBase-related query string into VFB/FlyBase IDs and metadata. Pass the raw text exactly as the user wrote it (for example "P{VT054895-GA
resolve_combination — Resolve an unresolved split-GAL4 combination name or synonym into its FBco ID and component hemidrivers. Pass the raw combination text exactly as the user wrote
list_connectome_datasets — List available connectome datasets with their labels and symbols. Use the returned symbols when constructing exclude_dbs arguments for query_connectivity. Commo
query_connectivity — Query synaptic connectivity between Drosophila neuron classes across ALL connectome datasets simultaneously for comparative connectomics. This is NOT pre-cached
get_predicted_neurotransmitters — Get the PREDICTED neurotransmitter(s) for a Drosophila neuron class — itself or any subclass — from per-instance connectome predictions (each reconstructed neur
get_known_neurotransmitters — Get the KNOWN (curated) neurotransmitter(s) for a Drosophila neuron class and its subclasses, from the ontology's classification rather than per-instance predic
get_hierarchy — Build a hierarchy tree for a VFB term, showing ancestors (parents) and/or descendants (children). Use relationship "part_of" for brain region structure (e.g. "w

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No long description beyond the summary.

kind Official MCP Registry

name Official MCP Registry

repoUrl Official MCP Registry

summary Official MCP Registry

version Official MCP Registry

description Official MCP Registry

homepageUrl Official MCP Registry

publisherName Official MCP Registry

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Official MCP Registryorg.virtualflybrain/vfb3-mcp

first seen 1 mo ago · fetched 31 h agoopen ↗

Field history (8 recent events)

29 d ago · declared · version → "1.11.2"
1 mo ago · declared · description → "MCP server for Drosophila neuroscience data from VirtualFlyBrain"
1 mo ago · declared · publisherName → "org.virtualflybrain"
1 mo ago · declared · homepageUrl → "https://virtualflybrain.org"
1 mo ago · declared · summary → "MCP server for Drosophila neuroscience data from VirtualFlyBrain"
1 mo ago · declared · version → "1.11.1"
1 mo ago · declared · protocols → ["mcp"]
1 mo ago · declared · repoUrl → "https://github.com/VirtualFlyBrain/VFB3-MCP"

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