GeneBe

Name: GeneBe
Author: net.genebe

MCP serverMCP

Annotate and classify human genetic variants with GeneBe (ACMG, gnomAD, ClinVar). Research use only.

by net.geneberepository ↗homepage ↗v0.1.0

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Evidence

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30-day availability6/6 checks ok

30 days ago

when	check	result	http	latency	detail
2 h ago	mcp initialize	ok	200	13 ms	server GeneBe 0.1.0 · protocol 2025-06-18 · 6 tools
9 h ago	mcp initialize	ok	200	13 ms	server GeneBe 0.1.0 · protocol 2025-06-18 · 6 tools
16 h ago	mcp initialize	ok	200	13 ms	server GeneBe 0.1.0 · protocol 2025-06-18 · 6 tools
23 h ago	mcp initialize	ok	200	13 ms	server GeneBe 0.1.0 · protocol 2025-06-18 · 6 tools
30 h ago	mcp initialize	ok	200	13 ms	server GeneBe 0.1.0 · protocol 2025-06-18 · 6 tools
2 d ago	mcp initialize	ok	200	12 ms	server GeneBe 0.1.0 · protocol 2025-06-18 · 6 tools

Tools observed via MCP handshake

annotate_variant — Annotate and classify one human genetic variant using GeneBe. Start here for any question about a variant (what is it, is it pathogenic/benign, how common is i
explain_acmg_decision_path — Explain step by step why each classification criterion did or did not apply to a variant. Use after annotate_variant when the user asks "why was this classifie
convert_variant — Convert a variant written in any notation into normalized hg38 genomic coordinates. Use when you only need the chr/pos/ref/alt of a variant (for example to tra
get_variant_effects — List a variant's predicted molecular consequences on every overlapping transcript. Returns per-transcript HGVS (c. and p.), consequence terms (e.g. missense_va
get_gene — Look up a human gene: identifiers, location, MANE Select transcript, ClinGen gene-disease validity. Use for questions about a gene rather than a specific varia
liftover_coordinate — Convert a genomic position, interval or variant between genome builds (hg19, hg38, t2t). Check `status`: RESOLVED means one result, AMBIGUOUS means several can

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kind Official MCP Registry

name Official MCP Registry

repoUrl Official MCP Registry

summary Official MCP Registry

version Official MCP Registry

description Official MCP Registry

homepageUrl Official MCP Registry

publisherName Official MCP Registry

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Official MCP Registrynet.genebe/genebe-mcp

first seen 2 d ago · fetched 2 d agoopen ↗

Field history (7 recent events)

2 d ago · declared · protocols → ["mcp"]
2 d ago · declared · summary → "Annotate and classify human genetic variants with GeneBe (ACMG, gnomAD, ClinVar). Research use only."
2 d ago · declared · description → "Annotate and classify human genetic variants with GeneBe (ACMG, gnomAD, ClinVar). Research use only."
2 d ago · declared · publisherName → "net.genebe"
2 d ago · declared · homepageUrl → "https://genebe.net"
2 d ago · declared · repoUrl → "https://github.com/genebe-net/genebe-mcp"
2 d ago · declared · version → "0.1.0"

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