[](https://glama.ai/mcp/servers/wjgoarxiv/pymol-mcp) - Headless PyMOL for molecular visualization, GROMACS/LAMMPS MD trajectories, and clathrate-hydrate cage analysis: H-bond networks, F3/F4 ord…
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[](https://glama.ai/mcp/servers/wjgoarxiv/pymol-mcp) - Headless PyMOL for molecular visualization, GROMACS/LAMMPS MD trajectories, and clathrate-hydrate cage analysis: H-bond networks, F3/F4 order parameters, and TRACE cage perception + occupancy.
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