{"$schema":"https://wellknown.network/schemas/agent-record-v1.json","schemaVersion":"1","id":"ag_s56yv3yuereq","handle":"tome-mcp","url":"https://wellknown.network/agents/tome-mcp","links":{"self":"https://wellknown.network/agents/tome-mcp/record.json","html":"https://wellknown.network/agents/tome-mcp","markdown":"https://wellknown.network/agents/tome-mcp/record.md","api":"https://wellknown.network/api/v1/agents/tome-mcp","status":"https://wellknown.network/api/v1/agents/tome-mcp/status","claim":"https://wellknown.network/agents/tome-mcp/claim","claimApi":"https://wellknown.network/api/v1/claims","claimDescriptor":"https://wellknown.network/agents/tome-mcp/claim.json","badge":"https://wellknown.network/agents/tome-mcp/badge.svg","openapi":"https://wellknown.network/openapi.json"},"ard":{"identifier":"urn:air::server:tome-mcp","type":"application/mcp-server-card+json"},"kind":"mcp_server","declared":{"name":"tome-mcp","summary":"DEPRECATED — use precis-mcp instead. Final release.","description":"# ⚠️ Tome — DEPRECATED\n\n**This package is deprecated. Use [`precis-mcp`](https://pypi.org/project/precis-mcp/) instead.**\n\n`precis-mcp` unifies paper reading (formerly tome-mcp / acatome-mcp) and manuscript editing into a single MCP server with 4 tools: `search()`, `get()`, `put()`, `move()`.\n\n```bash\npip install precis-mcp\n```\n\n---\n\n# Tome (archived)\n\n[![PyPI version](https://img.shields.io/pypi/v/tome-mcp)](https://pypi.org/project/tome-mcp/)\n[![Python](https://img.shields.io/pypi/pyversions/tome-mcp)](https://pypi.org/project/tome-mcp/)\n[![CI](https://github.com/retospect/tome-mcp/actions/workflows/ci.yml/badge.svg)](https://github.com/retospect/tome-mcp/actions/workflows/ci.yml)\n[![License: AGPL v3](https://img.shields.io/badge/License-AGPL_v3-blue.svg)](https://www.gnu.org/licenses/agpl-3.0)\n\nA Python MCP server that manages a research paper library: PDFs, bibliography,\nsemantic search, figure tracking, and Semantic Scholar integration.\n\nNo LLM inside — pure deterministic code. The AI client provides the intelligence;\nTome provides the tools.\n\nDeveloped and tested with **Windsurf** + **Claude Opus 4.6 (thinking)**.\nShould work with any MCP-capable client and sufficiently capable model,\nbut this combination is where the magic happens.\n\n## Installation\n\n```bash\npip install tome-mcp\n```\n\nFor development (tests, linting):\n\n```bash\ngit clone https://github.com/retospect/tome-mcp.git\ncd tome-mcp\npython3 -m venv .venv\nsource .venv/bin/activate\npip install -e \".[dev]\"\n```\n\n### Dependencies\n\n- `chromadb` — vector database for semantic search (includes built-in `all-MiniLM-L6-v2` embeddings, no external server needed)\n- `PyMuPDF` (fitz) — PDF text extraction\n- `bibtexparser` ≥ 2.0 — BibTeX parsing and serialization\n- `httpx` — HTTP client for CrossRef, Semantic Scholar, Unpaywall APIs\n- `mcp` — Model Context Protocol SDK\n- `PyYAML` — config file parsing\n\n### MCP configuration\n\nQuickest setup — uses `uvx` to run without a manual venv:\n\n```jsonc\n{\n  \"mcpServers\": {\n    \"t…","publisher":{"name":"Reto Stamm","url":null},"homepage":"https://github.com/retospect/tome-mcp","repository":"https://github.com/retospect/tome-mcp/blob/main/CHANGELOG.md","version":"0.8.0","license":"AGPL-3.0-or-later","protocols":["mcp"],"tags":["mcp","model-context-protocol","research","papers","bibliography","bibtex","semantic-search","semantic-scholar","citation","latex","pdf","literature-review","ai-tools","llm"],"pricing":null,"endpoints":[{"url":"pypi:tome-mcp","type":"package_pypi","auth":null,"probeable":false}],"skills":null,"tools":null,"extra":null,"attribution":{"kind":"pypi","name":"pypi","license":"pypi","repoUrl":"pypi","summary":"pypi","version":"pypi","description":"pypi","homepageUrl":"pypi","publisherName":"pypi"}},"derived":{"capabilities":[{"slug":"data.vector-search","name":"Vector Search","confidence":1,"provenance":"derived"},{"slug":"dev.package-management","name":"Packages & Dependencies","confidence":1,"provenance":"derived"},{"slug":"research.academic","name":"Academic Research","confidence":1,"provenance":"declared"},{"slug":"dev.version-control","name":"Version Control","confidence":0.745,"provenance":"derived"},{"slug":"dev.ci-cd","name":"CI/CD & Deploy","confidence":0.688,"provenance":"derived"},{"slug":"code.review","name":"Code Review","confidence":0.638,"provenance":"derived"}],"categories":["code","data","dev","research"],"language":"en"},"observed":{"status":"unknown","statusReason":"Distributed as a package to run locally; no network endpoint to check.","lastOkAt":null,"lastProbedAt":null,"statusComputedAt":null,"reliability30d":null,"latestObservations":[],"tools":null,"package":{"name":"tome-mcp","registry":"pypi","observedAt":"2026-09-10T14:24:29.135Z","publishedAt":"2026-03-30T13:26:17.776375Z","latestVersion":"0.8.0"}},"verification":{"claimed":false,"claimedAt":null,"proofs":[]},"provenance":{"sources":[{"source":"pypi","key":"tome-mcp","url":"https://pypi.org/project/tome-mcp/","firstSeenAt":"2026-09-10T14:22:50.436Z","fetchedAt":"2026-09-10T14:22:50.436Z","normalizedAt":"2026-09-10T14:22:50.436Z"}]},"firstSeenAt":"2026-09-10T14:22:50.436Z","updatedAt":"2026-09-10T14:24:29.135Z"}