{"$schema":"https://wellknown.network/schemas/agent-record-v1.json","schemaVersion":"1","id":"ag_78rugchy9dq3","handle":"protocol-mcp","url":"https://wellknown.network/agents/protocol-mcp","links":{"self":"https://wellknown.network/agents/protocol-mcp/record.json","html":"https://wellknown.network/agents/protocol-mcp","markdown":"https://wellknown.network/agents/protocol-mcp/record.md","api":"https://wellknown.network/api/v1/agents/protocol-mcp","status":"https://wellknown.network/api/v1/agents/protocol-mcp/status","claim":"https://wellknown.network/agents/protocol-mcp/claim","claimApi":"https://wellknown.network/api/v1/claims","claimDescriptor":"https://wellknown.network/agents/protocol-mcp/claim.json","badge":"https://wellknown.network/agents/protocol-mcp/badge.svg","openapi":"https://wellknown.network/openapi.json","history":"https://wellknown.network/api/v1/agents/protocol-mcp/history","tools":"https://wellknown.network/api/v1/agents/protocol-mcp/tools"},"ard":{"identifier":"urn:air::server:protocol-mcp","type":"application/mcp-server-card+json"},"kind":"mcp_server","declared":{"name":"protocol-mcp","summary":"MCP that connects to wetlab protocol resources, including protocols.io","description":"# protocol-mcp\n\n[![BioContextAI - Registry](https://img.shields.io/badge/Registry-package?style=flat&label=BioContextAI&labelColor=%23fff&color=%233555a1&link=https%3A%2F%2Fbiocontext.ai%2Fregistry)](https://biocontext.ai/registry)\n[![Tests][badge-tests]][tests]\n[![Documentation][badge-docs]][documentation]\n\n[badge-tests]: https://img.shields.io/github/actions/workflow/status/biocontext-ai/protocol-mcp/test.yaml?branch=main\n[badge-docs]: https://img.shields.io/readthedocs/protocol-mcp\n\nMCP that connects to wetlab protocol resources, including protocols.io\n\n## Getting started\n\nPlease refer to the [documentation][],\nin particular, the [API documentation][].\n\nYou can also find the project on [BioContextAI](https://biocontext.ai), the community-hub for biomedical MCP servers: [protocol-mcp on BioContextAI](https://biocontext.ai/registry/biocontext-ai/protocol-mcp).\n\n## Installation\n\nYou need to have Python 3.10 or newer installed on your system.\nIf you don't have Python installed, we recommend installing [uv][].\n\nThere are several alternative options to install protocol-mcp:\n\n### 1. Use `uvx` to run it immediately\nAfter publication to PyPI:\n```bash\nuvx protocol_mcp\n```\n\nOr from a Git repository:\n\n```bash\nuvx git+https://github.com/biocontext-ai/protocol-mcp.git@main\n```\n\n### 2. Include it in one of various clients that supports the `mcp.json` standard\n\nIf your MCP server is published to PyPI, use the following configuration:\n\n```json\n{\n  \"mcpServers\": {\n    \"protocol-mcp\": {\n      \"command\": \"uvx\",\n      \"args\": [\"protocol_mcp\"]\n    }\n  }\n}\n```\nIn case the MCP server is not yet published to PyPI, use this configuration:\n\n```json\n{\n  \"mcpServers\": {\n    \"protocol-mcp\": {\n      \"command\": \"uvx\",\n      \"args\": [\"git+https://github.com/biocontext-ai/protocol-mcp.git@main\"]\n    }\n  }\n}\n```\n\nFor purely local development (e.g., in Cursor or VS Code), use the following configuration:\n\n```json\n{\n  \"mcpServers\": {\n    \"protocol-mcp\": {\n      \"command\": \"uvx\",\n      \"args\": [\n   …","publisher":{"name":"Malte Kuehl","url":null},"homepage":"https://protocol-mcp.readthedocs.io/","repository":"https://github.com/biocontext-ai/protocol-mcp","version":"0.1.3","license":"Apache License Version 2.0\n        Version 2.0, January 2004\n  …","protocols":["mcp"],"tags":["mcp"],"pricing":null,"endpoints":[{"url":"pypi:protocol-mcp","type":"package_pypi","auth":null,"probeable":false}],"skills":null,"tools":null,"extra":null,"attribution":{"kind":"pypi","name":"pypi","license":"pypi","repoUrl":"pypi","summary":"pypi","version":"pypi","description":"pypi","homepageUrl":"pypi","publisherName":"pypi"}},"derived":{"capabilities":[{"slug":"dev.version-control","name":"Version Control","confidence":1,"provenance":"derived"},{"slug":"dev.package-management","name":"Packages & Dependencies","confidence":0.768,"provenance":"derived"}],"categories":["dev"],"language":"en"},"observed":{"status":"unknown","statusReason":"Distributed as a package to run locally; no network endpoint to check.","lastOkAt":null,"lastProbedAt":null,"statusComputedAt":null,"reliability30d":null,"latestObservations":[],"tools":null,"package":{"name":"protocol-mcp","registry":"pypi","observedAt":"2026-11-10T00:24:47.684Z","publishedAt":"2026-02-27T17:28:30.103474Z","latestVersion":"0.1.3"},"toolSurface":null,"endpointFacts":[]},"verification":{"claimed":false,"claimedAt":null,"proofs":[]},"provenance":{"sources":[{"source":"pypi","key":"protocol-mcp","url":"https://pypi.org/project/protocol-mcp/","firstSeenAt":"2026-09-10T10:24:09.176Z","fetchedAt":"2026-11-10T00:23:36.815Z","normalizedAt":"2026-11-10T00:23:36.815Z"}]},"firstSeenAt":"2026-09-10T10:24:09.176Z","updatedAt":"2026-11-10T00:24:47.684Z"}