{"$schema":"https://wellknown.network/schemas/agent-record-v1.json","schemaVersion":"1","id":"ag_28tfuemtka5r","handle":"mcp-pykingenie","url":"https://wellknown.network/agents/mcp-pykingenie","links":{"self":"https://wellknown.network/agents/mcp-pykingenie/record.json","html":"https://wellknown.network/agents/mcp-pykingenie","markdown":"https://wellknown.network/agents/mcp-pykingenie/record.md","api":"https://wellknown.network/api/v1/agents/mcp-pykingenie","status":"https://wellknown.network/api/v1/agents/mcp-pykingenie/status","claim":"https://wellknown.network/agents/mcp-pykingenie/claim","claimApi":"https://wellknown.network/api/v1/claims","claimDescriptor":"https://wellknown.network/agents/mcp-pykingenie/claim.json","badge":"https://wellknown.network/agents/mcp-pykingenie/badge.svg","openapi":"https://wellknown.network/openapi.json","history":"https://wellknown.network/api/v1/agents/mcp-pykingenie/history","tools":"https://wellknown.network/api/v1/agents/mcp-pykingenie/tools"},"ard":{"identifier":"urn:air::server:mcp-pykingenie","type":"application/mcp-server-card+json"},"kind":"mcp_server","declared":{"name":"mcp-pykingenie","summary":"MCP_PYKINGENIE is a MCP server that provides tools for the analysis of binding kinetics data.","description":"# mcp_pykingenie\n\n[![Tests][badge-tests]][tests]\n[![Read the Docs][badge-docs]][documentation]\n\n[badge-tests]: https://img.shields.io/github/actions/workflow/status/osvalB/mcp_pykingenie/test.yaml?branch=main&label=tests\n[badge-docs]: https://img.shields.io/badge/docs-read%20the%20documentation-0A66C2?logo=readthedocs&logoColor=white\n\nThis repository contains a local MCP server for the analysis of surface-based binding kinetics data from Octet and Gator experiments.\nIt is based on the Python package [pykingenie](https://github.com/osvalB/pykingenie).\n\n## Demo videos\n\n- [Example with Visual Studio Code](https://drive.google.com/file/d/1PtUdFNThLG6F2T55cUc4p69JeCwhSrNs/view?usp=drive_link)\n- [Example with Claude](https://drive.google.com/file/d/1iXqUMakI-m5Vrpya-cI7e0YT6krsfvbn/view?usp=drive_link)\n\n## Installation\n\nWe recommend running mcp_pykingenie with [uv][].\n\n### Run from the command line\n\n```bash\nuvx mcp_pykingenie\n```\n\nBy default, generated plots and relative-path input data are stored in\n`~/user_data_mcp_pykingenie/<YYYY-MM-DD>/`. To choose a different results\nfolder, set `RESULTS_DIR` before starting the server. Use the `print_data_dir`\nMCP tool to inspect the active output folder for a running server.\n\n```bash\nRESULTS_DIR=~/Documents/user_data_mcp_pykingenie uvx mcp_pykingenie\n```\n\n### Configure an MCP client\n\nAdd the server to any MCP-compatible client that supports the `mcpServers`\nconfiguration format:\n\n```json\n{\n  \"mcpServers\": {\n    \"mcp_pykingenie\": {\n      \"command\": \"uvx\",\n      \"args\": [\"mcp_pykingenie\"],\n      \"env\": {\n        \"RESULTS_DIR\": \"/absolute/path/to/results-folder\"\n      }\n    }\n  }\n}\n```\n\nAfter updating the configuration, restart the MCP client so it can launch the\nserver.\n\nIf you want to run directly from the Git repository:\n\n```json\n{\n  \"mcpServers\": {\n    \"mcp_pykingenie\": {\n      \"command\": \"uvx\",\n      \"args\": [\"git+https://github.com/osvalB/mcp_pykingenie.git@main\"]\n    }\n  }\n}\n```\n\n#### Claude Desktop\n\nIn Claude Desktop, open *…","publisher":{"name":"Osvaldo Burastero","url":null},"homepage":"https://osvalb.github.io/mcp_pykingenie/","repository":"https://github.com/osvalB/mcp_pykingenie","version":"1.1.5","license":"MIT License\n        \n        Copyright (c) 2026, Osvaldo Burast…","protocols":["mcp"],"tags":["mcp"],"pricing":null,"endpoints":[{"url":"pypi:mcp-pykingenie","type":"package_pypi","auth":null,"probeable":false}],"skills":null,"tools":null,"extra":null,"attribution":{"kind":"pypi","name":"pypi","license":"pypi","repoUrl":"pypi","summary":"pypi","version":"pypi","description":"pypi","homepageUrl":"pypi","publisherName":"pypi"}},"derived":{"capabilities":[{"slug":"dev.version-control","name":"Version Control","confidence":1,"provenance":"derived"},{"slug":"dev.terminal","name":"Terminal & Shell","confidence":0.825,"provenance":"derived"}],"categories":["dev"],"language":"en"},"observed":{"status":"unknown","statusReason":"Distributed as a package to run locally; no network endpoint to check.","lastOkAt":null,"lastProbedAt":null,"statusComputedAt":null,"reliability30d":null,"latestObservations":[],"tools":null,"package":{"name":"mcp-pykingenie","registry":"pypi","observedAt":"2026-10-28T12:23:05.468Z","publishedAt":"2026-10-26T15:14:36.750084Z","latestVersion":"1.1.5"},"toolSurface":null,"endpointFacts":[]},"verification":{"claimed":false,"claimedAt":null,"proofs":[]},"provenance":{"sources":[{"source":"pypi","key":"mcp-pykingenie","url":"https://pypi.org/project/mcp-pykingenie/","firstSeenAt":"2026-09-10T03:18:55.786Z","fetchedAt":"2026-10-28T12:22:16.229Z","normalizedAt":"2026-10-28T12:22:16.229Z"}]},"firstSeenAt":"2026-09-10T03:18:55.786Z","updatedAt":"2026-10-28T12:23:05.468Z"}