{"$schema":"https://wellknown.network/schemas/agent-record-v1.json","schemaVersion":"1","id":"ag_us29v4m8pcw2","handle":"iflow-mcp-uniprot-mcp-server","url":"https://wellknown.network/agents/iflow-mcp-uniprot-mcp-server","links":{"self":"https://wellknown.network/agents/iflow-mcp-uniprot-mcp-server/record.json","html":"https://wellknown.network/agents/iflow-mcp-uniprot-mcp-server","markdown":"https://wellknown.network/agents/iflow-mcp-uniprot-mcp-server/record.md","api":"https://wellknown.network/api/v1/agents/iflow-mcp-uniprot-mcp-server","status":"https://wellknown.network/api/v1/agents/iflow-mcp-uniprot-mcp-server/status","claim":"https://wellknown.network/agents/iflow-mcp-uniprot-mcp-server/claim","claimApi":"https://wellknown.network/api/v1/claims","claimDescriptor":"https://wellknown.network/agents/iflow-mcp-uniprot-mcp-server/claim.json","badge":"https://wellknown.network/agents/iflow-mcp-uniprot-mcp-server/badge.svg","openapi":"https://wellknown.network/openapi.json","history":"https://wellknown.network/api/v1/agents/iflow-mcp-uniprot-mcp-server/history","tools":"https://wellknown.network/api/v1/agents/iflow-mcp-uniprot-mcp-server/tools"},"ard":{"identifier":"urn:air::server:iflow-mcp-uniprot-mcp-server","type":"application/mcp-server-card+json"},"kind":"mcp_server","declared":{"name":"iflow-mcp_uniprot-mcp-server","summary":"MCP server for UniProt protein data access","description":"# UniProt MCP Server\n\nA Model Context Protocol (MCP) server that provides access to UniProt protein information. This server allows AI assistants to fetch protein function and sequence information directly from UniProt.\n\n<a href=\"https://glama.ai/mcp/servers/ttjbai3lpx\">\n  <img width=\"380\" height=\"200\" src=\"https://glama.ai/mcp/servers/ttjbai3lpx/badge\" alt=\"UniProt Server MCP server\" />\n</a>\n\n## Features\n\n- Get protein information by UniProt accession number\n- Batch retrieval of multiple proteins\n- Caching for improved performance (24-hour TTL)\n- Error handling and logging\n- Information includes:\n  - Protein name\n  - Function description\n  - Full sequence\n  - Sequence length\n  - Organism\n\n## Quick Start\n\n1. Ensure you have Python 3.10 or higher installed\n2. Clone this repository:\n   ```bash\n   git clone https://github.com/TakumiY235/uniprot-mcp-server.git\n   cd uniprot-mcp-server\n   ```\n3. Install dependencies:\n   ```bash\n   # Using uv (recommended)\n   uv pip install -r requirements.txt\n   \n   # Or using pip\n   pip install -r requirements.txt\n   ```\n\n## Configuration\n\nAdd to your Claude Desktop config file:\n\n- Windows: `%APPDATA%\\Claude\\claude_desktop_config.json`\n- macOS: `~/Library/Application Support/Claude/claude_desktop_config.json`\n- Linux: `~/.config/Claude/claude_desktop_config.json`\n\n```json\n{\n  \"mcpServers\": {\n    \"uniprot\": {\n      \"command\": \"uv\",\n      \"args\": [\"--directory\", \"path/to/uniprot-mcp-server\", \"run\", \"uniprot-mcp-server\"]\n    }\n  }\n}\n```\n\n## Usage Examples\n\nAfter configuring the server in Claude Desktop, you can ask questions like:\n\n```\nCan you get the protein information for UniProt accession number P98160?\n```\n\nFor batch queries:\n\n```\nCan you get and compare the protein information for both P04637 and P02747?\n```\n\n## API Reference\n\n### Tools\n\n1. `get_protein_info`\n   - Get information for a single protein\n   - Required parameter: `accession` (UniProt accession number)\n   - Example response:\n     ```json\n     {\n       \"accession\": \"P12345…","publisher":{"name":"UniProt MCP Server Contributors","url":null},"homepage":null,"repository":null,"version":"0.1.0","license":null,"protocols":["mcp"],"tags":["mcp"],"pricing":null,"endpoints":[{"url":"pypi:iflow-mcp_uniprot-mcp-server","type":"package_pypi","auth":null,"probeable":false}],"skills":null,"tools":null,"extra":null,"attribution":{"kind":"pypi","name":"pypi","summary":"pypi","version":"pypi","description":"pypi","publisherName":"pypi"}},"derived":{"capabilities":[{"slug":"dev.version-control","name":"Version Control","confidence":1,"provenance":"derived"}],"categories":["dev"],"language":"en"},"observed":{"status":"unknown","statusReason":"Distributed as a package to run locally; no network endpoint to check.","lastOkAt":null,"lastProbedAt":null,"statusComputedAt":null,"reliability30d":null,"latestObservations":[],"tools":null,"package":{"name":"iflow-mcp_uniprot-mcp-server","registry":"pypi","observedAt":"2026-09-15T20:21:32.987Z","publishedAt":"2025-11-18T08:07:25.971341Z","latestVersion":"0.1.0"},"toolSurface":null,"endpointFacts":[]},"verification":{"claimed":false,"claimedAt":null,"proofs":[]},"provenance":{"sources":[{"source":"pypi","key":"iflow-mcp_uniprot-mcp-server","url":"https://pypi.org/project/iflow-mcp_uniprot-mcp-server/","firstSeenAt":"2026-09-09T21:24:41.385Z","fetchedAt":"2026-09-15T20:20:24.146Z","normalizedAt":"2026-09-15T20:20:24.146Z"}]},"firstSeenAt":"2026-09-09T21:24:41.385Z","updatedAt":"2026-09-15T20:21:32.987Z"}